Once you have your miner running, you can then use MPH's auto exchange functions to trade the coins you don't want for the coins that you do want. All of the wallet handling and everything is done for you, you just need to provide a wallet address to send the coins that you want to keep to.
To keep track of profitability, go to the wallet for the coin that you are auto exchanging to and look at 24 hour profitability. Mind you this data takes 24 hours to be even close to accurate, but it shows you clearly just how much you made in the past 24 hours.
Thanks dude, that's a huge help.

I think I can see how it all works now, it just loops thru all the algorithms and MPH connects when the most profitable coin is selected. Nice idea with using different builds of ccminer also, I've tested the KlausT fork and it works great for me, I need to test some of the others asap.
I may even try and see if I can use the DSTM miner for equihash but I'm just going to start with the basics first.
