cloned the git repo, and got an error message:

user@computer:~/quarkcoin-cpuminer# ./autogen.sh
configure.ac:117: `PTHREAD_FLAGS' includes configure substitution `@PTHREAD_FLAGS@'
configure.ac:117: and is referred to from `minerd_SOURCES';
configure.ac:117: configure substitutions are not allowed in _SOURCES variables

Thoughts?

Thanks!