Here are the changes I made to fix eligius.

Changed all references to "eligius-eu", to "eligius".

Changed:
my $url1='http://eligius.st/~luke-jr/raw/'.($pool_name eq "eligius-eu"?"eu":"us").'/blocks/';
  to
my $url1='http://eligius.st/~luke-jr/raw/3/blocks/';

And removed:
eligius_rewards("eligius-eu");

In pool.config set the eligius URL to:
http://eligius.st/~luke-jr/raw/3/blocks/

I also used a new utility function with a constant utility since eligius now uses SMPPS instead of proportional rewards.  It should be the default if all other pools have a lower utility.

These have worked for me.  The website shows what I have earned.

Warning though, they are changing their servers around, so the code may need to be updated with new server names in the near future.