lucky7:  For FPGA and ASIC devices, CGWatcher gets their info directly from the miner. So if cgminer is detecting the device, CGWatcher should be also. CGWatcher does not try to detect devices on its own because there is no need to - if the miner can't find it it won't be mining. If you send me a debug report, I can look for a problem that would prevent CGWatcher from displaying the Jalapeno correctly. I have a Jalapeno and use cgminer and it displayed correctly for me, so it is not specific to the device.

If you are mining two separate instances of cgminer (one for the Jalapeno and one for the GPU), then you need to set each instance to use a different api port and then set CGWatcher to use the port of the instance you want it to connect to. You can find more information on running two instances here: https://bitcointalk.org/index.php?topic=159267.msg3853830#msg3853830
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I got it working , didn´t know that I should start mining from cgwatcher before it finds the devices. Not the same regarding GPU, that was found directly.

I do got hanging when trying to save(all instances), but it seems to get saved even if I close dirty.

Also in the 2nd instance I use for the ASIC I got 1 of the 2 GPU´s monitored, how can I get rid of that.