So what happens to these btc? They are also making all of ours more valuable by being completely inaccessible?
BTC-e will pick them up sooner or later...
But for who? For me? For them? They lost? Or what happens?

At blockchain, i see the transacrion, its confirmed, i see the value, i see my btc-e wallet there, at final balance i see the amount, but on the BTC-E i dont see nothing about this..
Thanks.
Eligius sent the coins to the address you used at the pool. BTC-e received and has the coins. BTC-e has not credited your account for the deposit. The issue is between you and BTC-e now.
In BTC-e's defense, when you create a deposit address there, right there it says:
We do not support generated transactions from pools like Eligius, P2Pool etc.It even specifically mentions Eligius by name.
-wk