Yes it does look as if the funds were sent as you noted.  It appears that Cryptsy sent the funds using the 1.1.2 Wallet, and at that moment the BTER may not have had their client updated to the most current version.  Is it possible for you to get your wallet.dat file from BTER, to better investigate? BTER may have to run 2 commands on the wallet.

checkwallet  -  This will show if any discrepancies exist (if so continue to next command)
repairwallet  - This will recount for the discrepancies.

The above information is just an assumption.  Hopefully BTER can get to the bottom of this.

CryptoBuck