Go one by one.
Or at that point, just use AWS servers because OP is now dealing with raw database files and encryption, not bitcoins. BDB and sqlite can easily be exported and stored in a different (RDS) database, and then all you have left to do is decrypt the secret data by yourself. No need to thrash your hard disk over this.
Everything gone over my head. If ever I have something to deal like this then I now know you can reach out to you :-) Let's not damage my brain in it now LOL