I am currently working on a Java library which facilitates decentralized CoinJoin-ing using a BitcoinJ backend.

As of this moment the library only works with fixed CoinJoin participants, I have yet to implement participant discovery (that's next on the list).
It also is very insecure at the moment, as I hacked together some sections in order to test general principles. It will be some time before the code is solid enough to not be embarrassing :\

Current plan:
1. Implement peer discovery (perhaps using a DHT)
2. Fix error handling and enhance verification of transaction components
3. simplify, refactor, rename
4. post source code (under a permissive OSS license)
5. Make CoinJoin process more anonymous.
6. ALPHA release?

example:
http://tbtc.blockr.io/tx/info/c4d86d7a054e5979172b223a15d5d9594f703d6376ab294ee4b2da45ff77b0eb

This is a test CoinJoin transaction between only 2 users. In this example I set the change and output address to be the same. The general caveats of a CoinJoin transaction still apply: each change address is clearly linked with an output address, and therefore by using blockchain analysis it may still be possible to link addresses. True anonymity requires minimal address reuse and tools for managing taint.

For now, though, I just send an unconfirmed transaction to a new address of fixed size, then use that unconfirmed transaction as part of the CoinJoin. Needless to say, for this scheme 0 confirmation coinjoins should not be accepted! Regardless, I am trying to write the library to be adaptable as possible to different types of CoinJoins, including coinjoins where each user has multiple inputs, casual coinjoins, and coinjoins without any change address.